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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45644823
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYTALLLAG LAVLTCKTWA LVDVRMEDVV EVTLKGQAKI SCTYTLTEEA KMIIWFTKLP  60
   61 GKDQNRKRFY YSENQTEIID QTHEYAERIK VSHSYDTEEE RGSVVLILDD VQLTDEREFI 120
  121 CMVHSVLNDV GEGRTHLKIY NSPSLPVIER EHTGISVSET EPSKVAQCKV DDGYPRPNIT 180
  181 WYKGSFPLDP SDGEVKILES VTVKPSGLFR VESELHIKVK KEDEGAHFYC EVKYLMLGKA 240
  241 RMTESSRFNV TVHYPTTNIK LSINPPDKLI KEGDTLELQC EGNGNPQPIF SFRHGERDLI 300
  301 NEDNGILHLK NVKRSDSGEY VCESLDLDTG MNYEDSLNIK VHYLDNIMVT PDETDPDQGH 360
  361 DITLTCNALS SLPTHTAWYK DGKLLVERHV LELHNASYET TGKYMCEVMV LSLPELKKQK 420
  421 SVQVNVRGKP EIKEGIKVNQ MNKVNHPVNL TCYAQGYPIP NITWTLFDQQ TGQIVPVLKI 480
  481 VNQMMDNSVH SLISVKATSD LIANCSATNE LGTDDASQSI KAFVRVTTIS PTSTTTEGGS 540
  541 GVIIAVIIIC LLLIAIVGSV LYYLYKKGKL PCGRSGKKDF MKQKASKDDI VMEMKSGKSE 600
  601 EAVLLQGVNG DKKSPTE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle