YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MARH2_BOVIN
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTGDCCHLP GSLCDCSDSP AFSKVVEATG LGPPQYVAQV TSRDGRLLST VIRALETPSD  60
   61 GPFCRICHEG ANGESLLSPC GCSGTLGAVH KSCLERWLSS SNTSYCELCH TEFAVEKRSR 120
  121 SLTEWLKDPG PRTEKRTLCC DVVCFLFITP LAAISGWLCL RGAQDHLRLH SHLEALGLIA 180
  181 LTIALFTIYV LWTLVSFRYH CQLYSEWRRT NQKVRLKMQA DGSEGSQHSP LAAGLLKKVA 240
  241 EETPV

Type	Start	End	Confidence
Cytoplasmic	1	137	0.97
Transmembrane Helix	138	160	0.88
Non-Cytoplasmic	161	174	0.84
Transmembrane Helix	175	195	0.91
Cytoplasmic	196	245	0.92