YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LYPA1_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGNNMSAPL PAIVPAARKA TAAVIFLHGL GDTGHGWAEA FAGIRSAHIK YICPHAPVMP  60
   61 VTLNMNMAMP SWFDIIGLSP DSLEDETGIK QAAENVKALI DQEVKNGIPS NRIILGGFSQ 120
  121 GGALSLYTAL TTQQKLAGVT ALSCWLPLRA SFPQGPIGGV NRDISILQCH GDLDPLVPLM 180
  181 FGSLTAEKLK TLVNPANVTF RTYAGMMHSS CQQEMMDIKQ FIDKLLPPVD

Type	Start	End	Confidence
Signal Peptide	1	22	0.54
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	230	0.95