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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45359319, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKGYTFMMS IAQVRSAGSA AGYYSDRDNY YVLGSLEERW AGKGAEQLGL QGAVDKEVFT  60
   61 RVLEGRLPDG ADLSRQQDGG NKHRPGYDLT FSAPKSVSLM AMLAGDKRLT EAHNQAVDIA 120
  121 VRQVEALAST RVMTDGQSET VLTGNLVMAL FNHDTSRDQE PQLHTHAVVA NVTQHDGEWK 180
  181 TLSSDKVGKT GFIENVYANQ IAFGKIYRAV LKEKVEALGY ETEVVGKHGM WEMPGVPVEA 240
  241 FSSRSQTIRE AVGDDASLKS RDVAALDTRK SKQHVDPEVK MAEWMQTLKD TGFDISAYRE 300
  301 AADRRAEIQA AQPVPSQEQP DIQQAVTQAI AGLSDRKVQF TYTDVLARTV GMLPPEAGVI 360
  361 EKARAGIDEA INREQLIPLD REKGLFTSGI HVLDELSVRA LSSDIMKQNR VTVHPEKSVP 420
  421 RTGSYSDAVS VLARDRPSLA IISGQGGAAG QRERVAELTM MAREQTLIVT HLNEDRRVLN 480
  481 SMIQDALAKP SEQQVTVPVL TTANIRDGEL RRLSTWENHQ GALALVDNVY HRIAGISKED 540
  541 GLITLQDADG NTRLISPREA AAEGVTLYNP ETIRGGGGGG PVRRLPLRWR EPKGAGNRWP 600
  601 VLSRRMWRCR V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle