YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55980163, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRALLALSRA IDALSEGVGR IIVWLVLAVS LLSAGNALMR YAFRYSSNAY LEAQWYLFSL  60
   61 IFLLGGAYAL KHNAHVRIDL VYGRLSKRTQ AWIDLVGTLL FLIPMSLGVI YLSWDWVANA 120
  121 VAIREMSPDV GGLPRWPIKI ALPVGFALLA LQGLSELIKR LAFLTGHLPD WTPGEEEEVV 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	20	0.95
Transmembrane Helix	21	42	0.92
Non-Cytoplasmic	43	52	0.86
Transmembrane Helix	53	72	0.92
Cytoplasmic	73	90	0.94
Transmembrane Helix	91	112	0.94
Non-Cytoplasmic	113	135	0.91
Transmembrane Helix	136	155	0.90
Cytoplasmic	156	180	0.93