YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|168467897, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSFIEGARQ PLLSVWRRAF LFSGALLLTA CSHNASPPPF TASGFAGDHG AVRIWRKDTN  60
   61 DEVHLLSVFS PWHSGSTTTS EYRWQGDTLS LIELNIYSKP PEHIRARFDA HGELSFMQRE 120
  121 VGGQKQQLSN DQIALYRYRA EQIRQTSDAL RLGRVILRQG RWHADHTVTT CEGETLKPDL 180
  181 DSWAISHIER RQNHSSVEVS VAWLEAPEGS QLLLVANSDF CHWQPQAKSF

Type	Start	End	Confidence
Signal Peptide	1	35	0.94
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	230	0.99