YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56130131, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQLPAWPRI TRESTAMYHL RVPQTEEELE RYYQFRWEML RKPLHQPKES ERDGWDALAH  60
   61 HQIVVDEEGN LVAVGRLYIN ADNEASIRFM AVHPSVQDKG LGTLMAMTLE SVARQEGVKR 120
  121 VTCSAREDAV EFFAKLGFVN QGEITTPTTT PIRHFLMIKP VASLDDILHR GDWCGQLQQA 180
  181 WYEHIPLSEK MGVRIQQYTG QKFITTMPET GNQNPHHTVF AGSLFSLATL TGWGLIWLML 240
  241 RERHLGGTII LADAHIRYSK PISGKPNAVA DLGSLSGDLD RLARGKKARV QLQVELLGGE 300
  301 TAGAIFEGIY IVLPAKPFGP YEEGGNEEE

Type	Start	End	Confidence
Non-Cytoplasmic	1	216	0.93
Transmembrane Helix	217	240	0.84
Cytoplasmic	241	329	0.81