YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56415686, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDSRKARRQ NDPGLQPERT SLAWFRTLLG YGALMALAVR HHWHQAGFLF WVSINVLAIV  60
   61 AVILWRYTLS RNLMDVAHSD FSETHVVRDK FLISLAVLSL AILFAVTHIR QLIAFIGNFI 120
  121

Type	Start	End	Confidence
Cytoplasmic	1	20	0.97
Transmembrane Helix	21	40	0.95
Non-Cytoplasmic	41	47	0.75
Transmembrane Helix	48	69	0.94
Cytoplasmic	70	90	0.93
Transmembrane Helix	91	109	0.96
Non-Cytoplasmic	110	120	0.80