YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56129797, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRVFVIAA IVSGALAVSG CTTNPYTGER EAGKSGIGAG IGSLVGAGIG ALSSSKKDRG  60
   61 KGALIGAALG GGVGYYMDVQ EAKLRDKMRG TGVSVTRSGD NIILNMPNNV TFDSSSATLK 120
  121 PAGANTLTGV AMVLKEYPKT AVNVVGYTDS TGSHDLNMRL SQQRADSVAS SLITQGVDAS 180
  181 RIRTSGMGPA NPIASNSTAE GKAQNRRVEI TLSPLQ

Type	Start	End	Confidence
Signal Peptide	1	17	0.98
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	216	0.96