YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56129776, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTMLRGWIT MIVMLTTINA QAACSWPAWE QFKKDYISQQ GRVIDPGDAR KITTSEGQSY  60
   61 AMFFALAAND RPAFAQLFNW TQNNLAQGSL REHLPAWLWG QKDPDTWSVL DSNSASDGDI 120
  121 WMAWSLLEAG RLWKETRYTE VGTALLKRIA REEVVNVPGL GSMLLPGKIG FAEANSWRFN 180
  181 PSYLPPQLAQ YFSRFGAPWS TLRETNLRLL LETAPKGFSP DWVRYESKQG WQLKAEKTLI 240
  241 SSYDAIRVYL WAGMMHDGDP QKARLLARFK PMATLTMKNG VPPEKVDVVS GNAQGTGPVG 300
  301 FSAALLPFLQ NRDAQAVQRQ RVADHFPGSD AYYNYVLTLF GQGWDQHRFR FTVKGELLPD 360
  361 WGQECVSSR

Type	Start	End	Confidence
Signal Peptide	1	22	0.93
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	369	0.99