YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|197363711, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKRRYVALL PLCVLLAACS STPKSSGTQA TTGTSSGGFL LEPQHNVMQM GGDFANNPNA  60
   61 QQFIDKMVSK HGFDRQQLQE ILSQSKRLDY VLRLMDRQAP TTQPPAGPNG AWLRYRKQFI 120
  121 TPDNVQNGVA FWNQYEDALN RAWQVYGVPP EIIVGIIGVE TRWGRIMGKT RILDALATLS 180
  181 FNYPRRAEYF SGELETFLLM ARDEQDDPLN LKGSFAGAMG YGQFMPSSYK EYAVDFNGDG 240
  241 HINLWDPVDA IGSVANYFKA HGWVKGDTVA VPANGQAPGL ANGFKTKYSL SQLAAAGLTP 300
  301 QQSLGNHQEA SLLRLDIGTG YQYWYGLPNF YTITRYNHST HYAMAVWQLG QAVALARVR

Type	Start	End	Confidence
Signal Peptide	1	30	0.90
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	359	0.99