YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56414432, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTLLAVSA ALALTSSFTA NAAENDQPQY LSDWWHQSVN VVGSYHTRFS PKLNNDVYLE  60
   61 YEAFAKKDWF DFYGYIDIPK TFDWGNGNDK GIWSDGSPLF MEIEPRFSID KLTGADLSFG 120
  121 PFKEWYFANN YIYDMGDNKA SRQSTWYMGL GTDIDTGLPM GLSLNVYAKY QWQNYGASNE 180
  181 NEWDGYRFKV KYFVPITDLW GGKLNYIGFT NFDWGSDLGD DPNRTSNSIA SSHILALNYD 240
  241 HWHYSVVARY FHNGGQWQNG AKLNWGDGDF SAKSTGWGGY LVVGYNF

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	287	0.99