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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|197094735, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.92
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIARWFWREW RSPSLIIVWL ALSLAVACVL ALGSISDRME KGLSQQSREF MAGDRTLQSS  60
   61 REVPKAWLEE ARKRGLNVGE QLTFATMTFA GDTPQLASVK AVDSVYPMYG ELQTRPDGVK 120
  121 PQPGSVLLAP RLMALLNLKT GDTIDVGDVT LRIAGEVVQE PDSGFNPFQM APRLMMNMAD 180
  181 VAKTGAIQPG SRVMWRYKFG GTPQQLAGYE SWLLPQLKPE HRWYGLEQDD GALGKSLERS 240
  241 QQFLLLSALL TLLLAVAAVA VAMSHYCRSR YDLVAILKTL GAGRAQLRKL IIGQWLMVLG 300
  301 LSAVTGGAIG LLFENILLML LKPVLPADLP PASLWPWLWA LGAMTVISLL VGLRPYRLLL 360
  361 ATQPLRVLRR DVVARVWPLK IYLPVACAVV VALLAGLMGG SMLLWAVLAG AVILALLCGL 420
  421 VGWMLLNVLR GMTLTSLPLR LAVSRLLRQP WSTLSQLSAF SLSFMLLALL LVLRGDLLDR 480
  481 WQQQLPPESP NYFLINIASE QVAPLKAFLA EHQVIPQTFY PIVRARLTKI NGNPTEGQQD 540
  541 ESLNRELNLT WQDTRPAHNP LVAGHWPPKP GEVSMEEGLA KRLNVKLGDS VTFMGDTQAF 600
  601 SAKVTSLRQV DWESLRPNFF FIFPSGALDG QPQSWLTSFR WENGNGMLTQ LNREFPTVSL 660
  661 LDIGAILKQV GQVLEQVSRA LEVMVVLVTL CGMLLLLAQV QVGMRQRHQE LVVWRTLGAG 720
  721 KKLLRTTLWC EFAMLGLVAG LVAAIGAETA LTILQINVFD FPWEPDWRLW VALPFCGALL 780
  781 LSVCGGWLGV RLLKGKALFR QFSG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle