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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|197362907, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTKIPDAVL AAEVSRRGLV KTTALGGLAM ASSAFTLPFT RIANAAEAIS PAKTGEKVVW  60
   61 SACTVNCGSR CPLRMHVVDG EIKYVETDNT GNDDYDGLHQ VRACLRGRSS RWRVYSPDRI 120
  121 KYPMKRVGKR GEGKFERISW DEAYDIIATN MQRLIKEYGN ESIYLNYGTG TLGGTLTRSW 180
  181 PPGKTLVARL MNCCGGYLNH YGDYSSAQIA AGLNYTYGGW ADGNSPSDIE NSKLVVLFGN 240
  241 NPGETRMSGG GITWFLEQAR ERSNARMIVI DPRYTDTAAG REDEWIPIRP GTDAALVAGI 300
  301 AWVLINENLV DQPFLDNYCI GYDEKTLPAD APPNGHYKAY ILGQGEDGIA KTPEWAAQIT 360
  361 GIPADRIIKL AREIGSAKPA YICQGWGPQR HANGEIATRA ISMLAILTGN VGINGGNSGA 420
  421 REGSYALPFE RMPTLENPVE TSISMFMWTD AIERGPEMTA LRDGVRGKDK LDVPIKMIWN 480
  481 YAGNCLINQH SEINRTHEIL QDDKKCEMIV VIDCHMTSSA KYADILLPDC TASEQMDFAL 540
  541 DASCGNMSYV IFTDQAIKPR FECKTIYEMT SELAKRLGVE QQFTEGRTQE EWMRHLYEQS 600
  601 RKSIPNLPTF EEFRKQGIFK QRDPEGHHVA YKDFREDPQA NPLTTPSGKI EIYSQALADI 660
  661 AATWELPEGD VIDPLPIYTP GFENYNDPLT DKFPLQLTGF HYKARVHSTY GNVDVLKAAC 720
  721 RQEMWINPMD AQKRGINNGD KVRIFNDRGE VHIEAKVTPR MMPGVVALGE GAWYDPDAKR 780
  781 VDQGGCINVL TTQRPSPLAK GNPSHTNLVQ VEKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle