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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56412889, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRFNPFVRV GLCMSAVTLA WPVAAATDDG ETMVVTASAI EQNLKDAPAS ISVITQQDLQ  60
   61 RRPVQNLKDV LKEVPGVQLT NEGDNRKGVS IRGLDSSYTL ILIDGKRVNS RNAVFRHNDF 120
  121 DLNWIPVDAI ERIEVVRGPM SSLYGSDALG GVVNIITKKI GQKWHGSVTV DSTIQEHRDR 180
  181 GDTYNGQFFT SGPLIDGVLG MKAYGSLAKR EKDEQQSSAT TATGETPRIE GFTSRDGNVE 240
  241 FAWTPNENHD VTAGYGFDRQ DRDSDSLDKN RLERQNYALS HNGRWDLGNS ELKFYGEKVE 300
  301 NKNPGNSSPI TSESNSIDGK YVLPLASVNQ FLTFGGEWRH DKLSDAVNLT GGSSTKTSAS 360
  361 QYALFLEDEW RIFEPLALTT GIRMDDHETY GDHWSPRAYL VYNATDTLTV KGGWATAFKA 420
  421 PSLLQLSPDW ATNSCRGGCR IVGSPDLKPE TSESWELGLY YRGEEGILEG VEASVTTFRN 480
  481 DVDNRISISR TPDVNAAPGY SNFVGFETNS RGQRVPVFRY YNVNKARIQG VETELKVPFN 540
  541 EAWKLSLNYT YNDGRDVSNG GNKPLSDLPF HTANGTLDWK PAQLEDWSFY VSGNYTGRKR 600
  601 ADSATAKTPG GYVVWDTGAA WQATKNVKLR AGVLNVGDKD LKRDDYGYTE DGRRYFMAVD 660
  661 YRF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle