YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	END4_SALPA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYIGAHVSA AGGLANAPAR AAEIGATAFA LFTKNQRQWR AAPLTPQVID DFKIACEKYH  60
   61 FSAAQILPHD SYLINLGHPV SEALEKSRDA FLDEMQRCEQ LGLTLLNFHP GSHLMQIAQE 120
  121 DCLARIAESI NIALAQTEGV TAVIENTAGQ GSNLGFEFEQ LAAIIDGVED KSRVGVCIDT 180
  181 CHAFAAGYDL RTPEACEKTF AEFGKIVGFQ YLRGMHLNDA KSAFGSRVDR HHSLGEGNIG 240
  241 HDAFRWIMQD ARFDGIPLIL ETINPDIWAE EIAWLKAQQI AEVMA

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	285	0.99