YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56460763, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRIVVLISG TGSNMQAIQQ ACEDEKVTGE IVAVISNKAS AKGLEKAAAK GIDTEVLSHK  60
   61 EFDSREAYDA ELKSLIDSYQ PDLVVLAGFM RILTGEFTRH YEGRMFNIHP SLLPKYKGVN 120
  121 THQRALDAGD TEHGVSVHFV TEELDGGPVV LQAKVPIFEG DTVEEVQARV HEQEHRIYPL 180
  181 VVNWFCQERL KLQGGRVTLD GEVLGAQGYA TE

Type	Start	End	Confidence
Signal Peptide	1	17	0.79
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	212	0.99