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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58337744, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSYDETVQD IITAVGGKDN IEEVFHCVAR LRFYLKDSTQ LNKTILQKNS NIYDFKFENN  60
   61 QLQILIGSDV NKYYKALMKC INEDKDFSKA KKGNIKMSKS SDKDKQLAEQ IVKLVGGKEN 120
  121 VNSLIHCVTR LRFKLKDESK ADDEAIKNLH GVMGVAHAGG QYQVIIGNNV TDIYDQVMPL 180
  181 LGLSSEQEVT QDDEKEGNIF SRLVALISSL FMPLLGVMTG AGMLKGLLVL FGVLGWVKQG 240
  241 TGTYMILNAA ADALFYFLPI LLGFTAGKTF KINPFVGAVT GGALVYPSMV AAATAHKAIT 300
  301 FLGIPVNLMN YSQTMLPIVI AIWGMSWLEK GTKKIIPSSV RNLFVPLLDL MIVVPLAYII 360
  361 IGPIMQTLSQ WLSEASLWIY GILPVAAGFI IGGIWQGAVI LGLHWAFIPV LMNNLMTNHF 420
  421 DPINGIMYCT LFGQVGACFA MGLKAKDKNF KEIAIPAAIS GLVGITEPII YGVTLPHKKA 480
  481 FAFASVGSAF GGAIAAACHA GMYTMPGGGI FGIPAFINPK GINMQFYGFL ISLLVAIVVS 540
  541 FVLTMIFGDT VVPSAPKAKV QVKKAEFKDQ AIYSPLEGTV VELKDVKDPV FSAGTIGKGI 600
  601 AVKPTNNEVR APFDGKVISV FPTKHAIGLK SENGVELLIH LGIDTVNLQG KYFDSMVKDG 660
  661 QEIKKGDLIE KFDVQAIQEA GYDTVVPIVV TNSNNFDDVI SEKKNGDKVN FGDQLLMATV 720
  721 EQDVNVQDSS IAKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle