YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58254560, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNIVFDLIN QSGYLAISLL IAIENIFPPI PSEVILSFAG FATHHSQMTV PLVIIASTIG  60
   61 AVLGALILYW IGYLLNEERL EKIFNHKLFK ILGFKKGDVK KAIRWFDKYG TGAIFYGRCI 120
  121 PVIRSLISIP AGTAKVKLSK FLIYTTLGSL IWNTILVCLG SYMGENWQVI VTIFEEYSLI 180
  181 IAALILIALV YGSVKWYRKK IKTN

Type	Start	End	Confidence
Cytoplasmic	1	11	0.79
Transmembrane Helix	12	31	0.77
Non-Cytoplasmic	32	49	0.70
Transmembrane Helix	50	73	0.91
Cytoplasmic	74	140	0.90
Transmembrane Helix	141	163	0.92
Non-Cytoplasmic	164	176	0.76
Transmembrane Helix	177	194	0.94
Cytoplasmic	195	204	0.84