YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|227903507, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVRKAIIPA AGLGTRFLPA TKALPKEMLP IVDKPTIQFI VEEAKKSGIE DILIIIGKNK  60
   61 RPIEDHFDAN PELEQDLKEK GKDELLELTQ GITNLGVNLY YTRQPHPAGL GDAIYRARSF 120
  121 VGDEPFVVML GDDLMDDKVP LTKQLIDRYN KTHASTIAVM PVPHEEVSKY GVIEPENEIL 180
  181 PGLINVKSFV EKPDVDKAPS DYAIIGRYLL MPEIFEILAN QKPGRGGEIQ LTDAIDTMNK 240
  241 TQRVFAHVFK GERHDVGNKE GYLETSIEYG LKHPEIKDQL REYIQRLGKK FEAEDKRKNK 300
  301

Type	Start	End	Confidence
Signal Peptide	1	23	0.80
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	300	0.99