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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60494732, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSELKTGE KGIIVKVLGH GGFRKRIVEM GFIKGKTIAV ILNAPLKDPI KYSLLGYEIS  60
   61 LRRQEAEMIE VVSEQETRTT QDSYYGPIIE ETMIPENKMA TLAKGKRRTI NVALIGNPNC 120
  121 GKTSLFNYAS GAHERIGNYS GVTVDAKENA FDFQGYHFRI VDLPGTYSLS TYTPEEVYVR 180
  181 KYIIEETPDV IINVVDASNL ERNFYLTTQL IDMNVRMVVA LNMFDELKAS GNQLDYLKLS 240
  241 RLLGVPMVPT VCRTGEGVDK LFHIIISLYE GIDFLTQEKL DVRTEVLEDL KGWHETYVPD 300
  301 HEFGSHSEEV HIKSHAYFRH IHINHGPELE RSIEAVKKLI SDNKQIRHKY STRFLAIKLL 360
  361 EKDKDIELFV KTLPNGSEIL ALRDKETQRL YKAINEDSEQ AITDAKYGFI AGALKETFVN 420
  421 NQKEKEQVTR IIDTIVTHHI WGYPIFFLFL YIMFEVTFVF GNYPMQGIEW LVEQLGNQIR 480
  481 NNMTEGPLKA LLVDGIIGGV GGVIVFLPNI LILYFFISIM EDSGYMARAA FIMDKIMHRM 540
  541 GLHGKSFIPL IMGFGCNVPA IMSSRIIEDR KCRIITMLIN PLMSCSARLP IYLVMTQAFF 600
  601 PSHAGFILLC VYSTGILLAV FMARIFSKLL MKGDDAPFVM ELPPYRMPTA KSIFRHTWEK 660
  661 GNHYLRKMGS IIMVASIIIW FLGYYPHDNY ETVAEQQENS YIGQIGKAIE PMIEPLGFDW 720
  721 KLGVGLISGI GAKELVVSTL GVLYTNESDI ENVNLSNRIP ITPLVALTYM LFVLIYFPCI 780
  781 ATLIAIKQES GSWKWALFSM GYTLVLAWGL AFTVYQLGSL IV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle