YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56680887, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRAFSQLTF TPAVRAHQER LGSARSYAKF IEGGPQQGHE IGPAEQAFIE ARDGFYQATV  60
   61 SEIGWPYVQY RGGPAGFLRV LGPRTIGYAD LSGNRQYISR GNLDGNSRVA LILMDYANQR 120
  121 RLKILGRMKF TEGPEAAASL LPDGQTHPAE RAAIISVEGL DWNCPQHITP RYTEAELAPH 180
  181 LNALGAELAQ LRAENERLKQ QLSEQD

Type	Start	End	Confidence
Signal Peptide	1	16	0.85
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	206	0.99