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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56709170, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDQSSASAA LNALLAPKSI ALVGVSDRAE SYGRALDRMV SEGGFAGRVM RVNPRLAAQS  60
   61 QGRIAASLDE LPEPPEHVVL SVATARVEAA VDAALAAGAR ALTVFSACPD AAMRERIGDK 120
  121 VRAAGAALCG PNSMGFHNIT LGLRVTPFPV PLDLRAGGVG LIAQSGSILG ALMNNDRRLR 180
  181 FSQAVSTGSE TVTTAADYLR WMVDQPETRV VGLFLETVRD PQGFIAAMEA AAARDIAVVI 240
  241 LKVGRSALSA RMAISHTGAL VGDDAVLRAL VHRLGGHMAG SLDEMAAMLA LFAQGRRATA 300
  301 PGIASIHDSG GERELMADMA EDHRLDYAAL SPATTAAIQA VLEPGIAAEN PLDAWGTGQG 360
  361 ARETYTRALA AMMADARVGT GLYVLNWRGN YYLHEMHAQA LGDAFGQTEK PLAAVSNFSR 420
  421 SDDAMLAGRF ADLGIPLISG MQNAMAAVRA LHDHGPVSRF RAPEPPHPRA QYWRDVLGGR 480
  481 DWIGEAEGLA LFADFGIESP SHALVGTREE AFLAAERIGG PVVLKTAQPG LSHKSDSGGV 540
  541 KIGLATPQAV AEAFDDLAAR FQGDILVAEM VAPGAEWSMG AINDPDFGPA VRIAPGGIFV 600
  601 DLIDEHVLLI APFSAAEAAA AIDKLRAGKL LAGLRGRPTL AASQLAHAAA ALSRLAWDLR 660
  661 DTLAEVEINP IIVNTQGAMA VDAVIRAHPS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle