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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56680832, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHSAHSHPT PDTPDIFTCP MHPEVRQSAP GSCPKCGMTL VSEQAAALHA QCHGQGHGPG  60
   61 HGGTDEPGGK YDSVPAGWTG SVYTCPMHPQ VRQTDPGSCP LCGMGLELDS VASADDGPNP 120
  121 ELVDFTRRFR VGAVLTLPLL VLTMGPYLGF PEVRTLFGER MTLWIELVLG TPVVWWCGWP 180
  181 FMMRGWTSFR TRHLNMFSLI AMGVLAAWLF SVAAVLWPQV FPDGFRDAEG NVGVYFEAAA 240
  241 VIVTLVLLGQ VMELRAREGT GKAIRALLDM AAKTARVIRD DGREEEIPLD AVQRGDRLRV 300
  301 RPGDKVPVDG VVTEGRSSVD ESMITGEPVP VEKVAGDRLT GATINGTGSL VMEATRVGAD 360
  361 TMLSQIVEMV SNAQRSRAPI QKYADQVAGM FVPAVIVIAA LAFVGWAFWG PAPALSYALV 420
  421 AAVAVLIIAC PCALGLATPM SIMTATGRGA QAGVLIKNAE ALERFEKVDT LIVDKTGTLT 480
  481 MGKPRLVAVL PEAGHDEGEV LRLAATLEKG SEHPLAEAIV AGAEERGVAL GTATDFEAVT 540
  541 GKGVTGTVDG KAVALGNRKL VEDLGLDAGN LAETANTRRD EGETVMFVVV EGALAGLVAV 600
  601 SDPVKETTPA ALKALHELGF RIIMATGDNE RTAKAVAARL GIDEIRADVL PEDKARIVRE 660
  661 LQAEGRKVAM AGDGVNDAPA LAQADVGIAM GTGADVAIES AGITLVKGNL DGIVRARRLA 720
  721 RATMRNIRQN LFFALIYNAS GVPVAAGLLY PFFGILISPM FAAFAMSASS ISVVLNALRL 780
  781 RGTRI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle