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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56709092, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.33
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDTTRVTRV AIIGGGIMGV AAQFQLAENG WTDTILFEKA ELTSGSTWHA AGQIAHAVGS  60
   61 RIAGWINKTS IETYKRVEKE TGQSIGWHEV GGFRIATTDD EVDWMKSIMG VGRLLDLPMD 120
  121 LVGPDEVAKG NPFYKVDNVK AAVQTYEDGH IDPSGVTMAL AAATRARGAK IERRNQVLGA 180
  181 SRKGDMWCLR TEKGDVLAEH VVIAAGSYAN QVGEWFGLKI PSVSCLHHYL VTDRVPEFEG 240
  241 RPELPVMRDN AFGGYIRQEQ KSGLIGIYEG HVCPTVWEMP KGAPWAAENE LFEADYDSIG 300
  301 DFLMIAFDKM PILAELGIKR VVRGAITHTP DGGMLVGPSG APNVWLSCGS SIGLAWGGGA 360
  361 GKVLADWMVH GETSINTRSL DPRRYGDFAS DHYIVERTKD EFMRRHDTPC PGKQFHSLRP 420
  421 LNRHQLYDRL AAKGAVFGEI AGWERPRYFG DVGEVEQIGW GHQSWHENAL AEAQATRATA 480
  481 GVIDLCAFAQ FEITGTDAGK LLNRLSANRI PHKDGRMSLN HLLTEKGRFE TEITIWRINE 540
  541 NRYFTGSPIT RANPDFAWIK SHIRPGEDVQ MVNRSADWGM LAMSGPASRR ILSELTDADL 600
  601 SNAAFPWLSG QEITVAGVPC YALRVSFVGE LGWELHALLN RIPELYDALF DVGSAHGLTD 660
  661 LGSYAFNGMR MEKAYRASGE LTTDIGPFDV GLERFVVTEG RDFIGKEALL QRDPEWELFY 720
  721 AELQSDDIDI HGGEPVFFRD QIVGLTTSGG YGYTLGKSLG WLFVRKGTPR ADIAVRILNE 780
  781 TYPVTIHDAP LFDPDNLRPK AED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle