YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PSD_RUEPO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMRDTFLKP MHPEGRKFVG IFAAITVILF LIWSVLGWIG VGLTVWCYYF FRDPERVTPA  60
   61 REGLIVSPAD GIVSMIEKSV PPAELGMPDQ ALTRISVFMS VFNCHVNRAP IAGRIAAIAY 120
  121 RPGKFFNASL DKASADNERN SLCIEMADGR QIAVVQIAGL VARRIVCFSS TGDTLRTGER 180
  181 FGLIRFGSRL DVYLPEGVEP MVDLGQTMIA GETVLADLQ

Type	Start	End	Confidence
Cytoplasmic	1	17	0.95
Transmembrane Helix	18	42	0.91
Non-Cytoplasmic	43	219	0.68