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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56709071, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKGLSRMFQ PRSIAVIGGG AWCRQVIVQC RRMGYGGAIW PVHPKAVEVE GYPAFARLED  60
   61 LPGAPDAAFI GINRHATIEA VALLSAMGAG GAVCFASGFS EALAEDETGG DLQAALVAAA 120
  121 GEMPILGPNC YGFVNALDGA LLWPDQHGCS RVERGVAILT QSSNIAINLT MQQRGLPIAY 180
  181 VVTCGNMAQT GQARIAMALL DDPRVTAIGL HIEGFGDLRD WEALAAKAHA RGVPLVALKV 240
  241 GASEQAQQAT VSHTASLAGS DAGAQALLDR LGIAPLRALP DLLETLKLLH CNGPLTGVDI 300
  301 ASISCSGGEA SLIADMSVGS ALRFPALTAR QRQALRAALG PMVALSNPLD YHTYIWRDAQ 360
  361 AMAAAWSGMT GDGIALTFSI VDYPVTDPAD WTCATQAALK VRAETGAPFA VVATLPELMP 420
  421 ADVAAELMAG GVVPLMGLRE ALAAAEAAAS LHAPDPVPVC LPGQEDATQL LDEGAAKAAL 480
  481 AAHGLEVPRN RTARADEAAQ AVEGMCGPFA VKGVGLAHKS EHGAVRLGVP AADVARVAAE 540
  541 IGTPEVLIEE MVSDAVAELL IGVIRDPAHG FVLTLGAGGV LTELMRDTVS LLVPAARADI 600
  601 AAALQRLRIA PLLAGYRGKP GADMDAILRA VEAVQDYVLA HAGTLGEVEI NPLLVAPDRA 660
  661 VAVDALIRLE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle