YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56709007, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPLVLTLVA ALMAGTAGAQ TVATGDLGLV IERATGSVLL VDQSERAALA RIEGLGDLSH  60
   61 ASLVYSPDER FAYVFGRDGG LTKLDITTRQ IVNRVLQSGN AIGGAISDDG RLVAVSNYDP 120
  121 GGVRVFDADT LEMVADIPTG GKTIGLVDAP GRRFVFTVWD TGETWIADFT SPEPMLTTIP 180
  181 GMGKNPYDAL ITGNGRTYIT GLFGEDGLSA LDLWDETPQP IRVLPGYGRG QQEMPVYKMP 240
  241 HLEGWALTGR EFVLPAVGHA QVLWVDADTL TETGRTATHG QPVFAMARPD GRQVWVNFAH 300
  301 PLNDTIQVID TVSKEVIHQF KPGPAVLHME FTPRGHEVWI SVRDAGKVMV YDTRTFEKLR 360
  361 EIEADSPSGI FFTVRAHRTG L

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	381	0.99