YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56680687, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAHSLTPIC IFDFEDGRAI PVAEDWPAAA PASGAGFRWL HLDLSDPASA DWLHAHIPPV  60
   61 AASALAQAET RPRCDPLADG ILLNLRGVNL NPGSAREDMV SLRLWVTPAL VVTARIRRIR 120
  121 ATDELRQQSD SGRGPGSVAL FLSELLHGLS HRIETVSLEL DDRTDGIEEE ALQGAGDMHD 180
  181 RLSALRLTVI KLRRYLHPQR EALDALLRNE AGLFDSAGLV LLREAVDRTR RTIEELDATR 240
  241 DRLAAVQDQI ASEQVRLLGR NSFVLSVVAA VFLPLGFLTG LFGVNIAGMP GTGTPLAFWL 300
  301 LAGASALLGL AIVLLFRLLK WL

Type	Start	End	Confidence
Cytoplasmic	1	262	0.95
Transmembrane Helix	263	284	0.92
Non-Cytoplasmic	285	295	0.78
Transmembrane Helix	296	319	0.90
Cytoplasmic	320	322	0.90