YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56680686, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREVMTKSMA RNIFYGGSLF FILIFLALSA HSHMYIRSTS TNAETLTASV ADGKHVWEKH  60
   61 ACINCHSILG EGAYFAPELG NVMTRWGVQD DPDAAFEMLK GWMEAQPTGI EGRRQMPRFD 120
  121 LSDTEMRNLS DFLLWTNTID TQGWPPNDAG

Type	Start	End	Confidence
Cytoplasmic	1	11	0.81
Transmembrane Helix	12	33	0.80
Non-Cytoplasmic	34	150	0.97