YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56543164, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKEILMRIL AKSIALAILT TTPILAATTT TSPLHSIHTK WEEHKADRAL DHLSQSGQYA  60
   61 MVDILQAKHI LDSGESASAL PLLLRASKRL VAAGNDRQKF IAAESDLHPV PQHPASSSHT 120
  121 PVIEKMAWIP VGGEFIVGEE LAPEKKTAIA TANSQLKSGQ RQEVVETMKV VGEDTDFIVA 180
  181 LAPLAQTQKA INQAIALAKS NKSQEASQVL DHVMDSLVFI SDNDVETVIP TSKHASTPHK 240
  241 K

Type	Start	End	Confidence
Signal Peptide	1	26	0.96
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	241	0.99