YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62185179, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRFLRNYAL YFAWLISCTG TVMSIYYSYL LNIEPCVLCY YQRICLFPLS IILGIATYRE  60
   61 DDLVKIYALP LSIMGMLIAV YQICLQEIAG MTIDICGRVS CSTKLFIFGF ITIPMASALA 120
  121 FCAISCLLIL SDSKKR

Type	Start	End	Confidence
Cytoplasmic	1	9	0.86
Transmembrane Helix	10	30	0.95
Non-Cytoplasmic	31	38	0.82
Transmembrane Helix	39	58	0.93
Cytoplasmic	59	65	0.83
Transmembrane Helix	66	85	0.94
Non-Cytoplasmic	86	105	0.88
Transmembrane Helix	106	130	0.90
Cytoplasmic	131	136	0.89