YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57167484, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFVFLICCA CLVFANEILL LSKFDKQDFN SKDFNAYLMS EKLDGVRGIW DGKYLKTRQN  60
   61 YKIKTPDFFT KNFPPFAIDG ELWIARNKFD EISALIRSGD SNLTLWKEVT YNIFDVPNAC 120
  121 EEFQISTCTL KNCLAVLEEY LQKYPSAYIK IISQIPVENQ NNLNQFYESI IKNQGEGIVI 180
  181 RKNLSPYEKG RSKNAMKLKP YDDAECELVG FRKGKGKFEN QVGALLCKMP NGQIIKIGSG 240
  241 LKDEDRKNPP KIGSIVTYKF NGLTKNSLPR FPVFLRIRDE NP

Type	Start	End	Confidence
Signal Peptide	1	15	0.99
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	282	0.99