YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57238630, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKILIIMSL FLITLNAKER LVVLDPASIE TLFMLKAEDQ IVGIATLQHS NIYPKDQTSK  60
   61 LTSVGTFSNP SLEKIVALKP SLVILSSYSL NLEEGLKNFG IKSINLKAEH LEDITKNITT 120
  121 LGQITKKEKE AELLKQEFNQ KFKKLSDKPL NKSAIYLYSS NPLMAFNDNS LIADILRLIG 180
  181 IKNLSPQSQI SRPVISAEYI LKQNPDILIL GMNAKNNLLD TNALLKNTKA VKTGSIYFNK 240
  241 DTPILLRLSP KIIDRIQEFK TKLENNNF

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	268	0.99