YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57167387, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIENLAFVFF SVVVLGFFGI AVLSKNMLYS LSALAGGMVF LSGFYFLLDA EFLGVIQIIV  60
   61 YSGAVLGLYS FAMMFFDASK EFKEQLKAKK SFFTLVVLSA ILLLTMLIGF KYQNISTDLP 120
  121 LNDPALFDFN KQLALAIFSK YLLAFEFIAI LLLIALVCAI VLTHKELTKE KQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.81
Transmembrane Helix	5	23	0.90
Cytoplasmic	24	27	0.71
Transmembrane Helix	28	48	0.81
Non-Cytoplasmic	49	54	0.76
Transmembrane Helix	55	76	0.90
Cytoplasmic	77	90	0.92
Transmembrane Helix	91	110	0.95
Non-Cytoplasmic	111	141	0.92
Transmembrane Helix	142	163	0.93
Cytoplasmic	164	172	0.92