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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57238578, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILFLILLS FLNAFAFELV LNTGRENNQA FAVLHASNDL EFTCQKFITE AKVHFECDIA  60
   61 GMVDNKLKDQ SFSAFDLKFI QEAQKIKMII LPKIQARMFD TSQNIYIDKE LSSSSSHKSK 120
  121 AFTFIFTPEL APIKDYDGLD FNINFPHESL PYVGALDLNS DPVVIPQSAD INTYLRIKKE 180
  181 YDKANYNQVV IDAQNAINRY RGSIFTSEFI LYKLRAQNKL YTQDPSMRDQ QILEKMIDDA 240
  241 KNWTRTFTSD KNFSEVLHIM LRTYIALAQR ADVEYTMSIL DNEQPNNYFT QLSKLDYADY 300
  301 IYNLNEKEKA VNIYENTYFN TKNLDLAARA AMSLAKNLLS NEQVNKAIEY INTILKANPE 360
  361 YFGKDIPRSL ELAKLFNQKG QFDISASIYE DAFAKMSKLD PSYEETLKDL ALVLSHANRS 420
  421 SDAKKYLDLY MDDYLDGKYL DEIKKASDEV FFALGDNNAS FLHQRYTDLM KQYANKDENI 480
  481 ANKALDEDVA LYYKEGNFSA ILAYKDLIES KKIPNATQFL EKAAINDLKN AIKADNCINA 540
  541 ANIFMRFSAY DIGQKIENKK QMLACLIRTS NVEQALDYID KNYNEDSIFY GLQKASILFD 600
  601 NKQYPQVIKI SKDIANSRIL KSDDENFKAY YLQFLSLLRL NDYNQAIKIL QILESFPMNF 660
  661 SMVEAYDALL SYANDHNMQT TILTYAPKAI DYQNFKGINL FSPNLEFIYL DALTKINKNE 720
  721 ESLAVLTDLL KLKLSDEDRA RALYIQALTY ERMQNIQAEK ESLKQCLEIK SASNWQNLCK 780
  781 SKNQILNQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle