YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57238558, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIISLALA LALSASAAEL KMATTTSTDN TGLLDALKPL YEKESGNTLK WVAVGTGAAL  60
   61 KMGEDCNADV LFVHSPKAEK EFMKKDFGVD RTPVMYNDFI IIADKSLASK FKGKNLKESL 120
  121 ELIKNEKLTF ISRGDKSGTD NKEKSLWKNL GGVPEKQSWY QQSGQGMLAS IKIAEEKKGV 180
  181 ILTDRGTYIK YEANEKGKPN LVIVNEGDDS LKNFYSVIAT NPKHCKNVNY TEASKFIKWV 240
  241 TSDKTLNFIA DFKLLNKPLF VIDAKTRKD

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	269	0.99