YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57167299, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQERIKELEL RYKYFLLKKY LKYLLLVILI SVIAFCFFVL MQKYNKQKNI YLQAIEHKKH  60
   61 LEQKILQAQI LQEKNKISRE KLYKELEEVK AVQENTHISK IEIDSKILNI SDLKKSFYQN 120
  121 PNYEKALNLA KKYFDIKAYQ KTIFWALKAN ELDKQKQDSW LIFAQAKRAL GEEKEAQSAL 180
  181 DAYINYYGLI ELDGK

Type	Start	End	Confidence
Cytoplasmic	1	19	0.97
Transmembrane Helix	20	41	0.96
Non-Cytoplasmic	42	195	0.97