YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57238445, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEELENEET KKKKGGSLVI IIVILLFVLL LSIMGVIAWL ISSSSSDESE VKEAPKEEAK  60
   61 TDKPKVSAPT QRGSDFANIG PMYPLDPFTL NLLSDSGSRY VKCTIELEQN SELLKPELDK 120
  121 KVPVIRDIII RTLTAKTFEE VSTQKGKERL KDELVGKINE ILTDGFIKNV YFTDFVVS

Type	Start	End	Confidence
Cytoplasmic	1	17	0.96
Transmembrane Helix	18	41	0.93
Non-Cytoplasmic	42	178	0.99