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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57238399, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNILRLGI VVLVLLIAGV LWLNNDINQK KEDEANKNAI AANADFSLLS DDDPNFEKWG  60
   61 KVFPEQLKMY LTVEKEEPKA TEFGGNLAYS KLIRFPQLTI LWAGYPFSLD FNEERGHFWV 120
  121 QVDQMKTARN NKDFLNAHGL AAFKGQPAAC MNCHSGWTPW LIKNVAKGDF TAFNSTNYWT 180
  181 MIKNIPAVDG IVENSPEHAG PHGGKRMGVT CADCHNPNDM SLRLTRPAAI NALVSRGYEK 240
  241 DPVQGVKATR EEMRTLVCSQ CHVEYYFKPT GEKVKVMGET IVDDSSKKWW NGTQKNYDEY 300
  301 EFWRDGNKAK EIETDGIVLT FPWSEWKKGQ PFRIEMLDDY YDKVRGVFGA DFTHKLTGAQ 360
  361 IIKIQHPESE LYSGGVHAAN GVSCVDCHMP YVREGAKKVT QHNITSPLRD INSACKSCHK 420
  421 QSEDYLKAQV LDIQNSVAHD QRTAEYAIVS LIMDTKKLRD ELGNMEKFQS DGKADAKKIS 480
  481 EELKEVLELH RKAQMRADFV NAENSTGFHN PREASRMLLQ AVDMARMGQT KLVEIAAANG 540
  541 IKDFKTSNLG FEDIQKFNPG ELYYKVDVNN HKAGERYYAD EKDVNGNPPK ELLEHDKELA 600
  601 PYNYQVIDKK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle