YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57167198, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKIALFLSL CVFIWASDLQ QALEYEKQGD YKKAMEIYKK LALKNSSVLI SQEQNNSSEA  60
   61 TQMQNSITIK KEEKQDFSRL ALANYLGENE SFNPLGISSY KMNYFLPFAY SFNSLGTNNN 120
  121 KSEAKFQLSV KKRLFENLLG LDEKYYIAYT QTSWWQIYKH SSPFRETNYQ PEFFIDLPLY 180
  181 LKDYEFFNNL RVGILHESNG KGDENLQSRS WNRIYVSTAI LYNKFLFVPR LWYRIPENKK 240
  241 DDDNPAILHY MGNFDVNLAY LGDDYFINLM LRNNLKFHNN KGAIQVDLGY DIFNNGIYWY 300
  301 LQYFNGYGES LIDYNKHLQR LSTGFLISY

Type	Start	End	Confidence
Signal Peptide	1	21	0.91
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	329	0.99