YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57238281, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYKKIKALY FWIFFVLSVA LVIFCFCFTK SQNTLWKIRK IWAKFQRYTI SYKQEIIGTF  60
   61 NPQAQMILMN HQSALDIIAL EELYPKNLCW IAKKELGEIP IFKVAMKKPK LLCIDRKNPR 120
  121 DLVRVLKEAK ERISEDRVLA IFPEGTRSKN EKMLKFQSGA KILSEKLNLK VQPILIVDSA 180
  181 KILDTKSFSA SSGVLKIICM DLVDTNDDKW LENTRKKMQE LLDQERAKLC

Type	Start	End	Confidence
Cytoplasmic	1	7	0.68
Transmembrane Helix	8	29	0.77
Non-Cytoplasmic	30	230	0.87