YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57238191, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKILSLSVA SLALCGALNA ADLKIAGSST VYPFTSFVAE EYAAIHNTKT PIVESLGTGG  60
   61 GFKVFCEGIT DISNASRAMK FSEFETCKKA GVTDIVGIMV GYDGIVLAQN KTNAPLNITK 120
  121 KELFLALAKE IPQNGKLIPN PYTNWNQINK NLPNRKISVY GPPSSSGTRD TVEELVMSDI 180
  181 SKKIPEYKGE YKTIRQDGAY IPSGENDNLI VSKLTIDKDA FGLFGYGFLV SNVDKINAAD 240
  241 IDGVKADEKN IADGKYDLAR SLFIYINAKK NPKEAFDFAK IYMSDDLAKS GGELEKIGLV 300
  301 PLSDDKLKAS QKHVEDRKIL NDELVKAGKV F

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	331	0.99