YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57238137, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIYKEAFMQ NKEEKLQRKA EYEFSIGLRL THWVRAIAIV ILIGTGYYLS YVFQSPISNG  60
   61 EPVNFMQAKY RLVHQAVGFV LIACIIFKVY LFFCDKVSAK ERRSVWDIFN IKLWIEQVKF 120
  121 YIFLGKHPHL KGVYNPLQFV TYFFFYLVIL GIILTGLILY THTYHEGLGG LLYHILRPLE 180
  181 AAMGGLADVR TYHRILMWVI MIFVPVHIYM AIFNAVKGKD GAMDAIISGY KFVKEEKH

Type	Start	End	Confidence
Cytoplasmic	1	31	0.97
Transmembrane Helix	32	51	0.94
Non-Cytoplasmic	52	71	0.92
Transmembrane Helix	72	94	0.92
Cytoplasmic	95	138	0.97
Transmembrane Helix	139	162	0.89
Non-Cytoplasmic	163	193	0.87
Transmembrane Helix	194	213	0.94
Cytoplasmic	214	238	0.88