YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57238051, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFVNYLGDK NVVTFMLLLA RMSGLIVFFP FFSHNSIPMV IKSTIVLFLT MYLYPLARLE  60
   61 SLHLDSFFVL QLISEVIFGM IAGLMLQIIF AIIMMAGEQI AFTMGFTMAS ILDPSSGTSM 120
  121 PITAQILNLL ALMFFLAFDG HHLMLLFLSH SLGYISLGGF YPHENLMHYL NMGMFNIFII 180
  181 GFTMSFPILG ISLLADVIFG LLMKTMPQFN LLVIGYPIKI ALGFVVLIAI LLVMMQYFKN 240
  241 LILELFTHMQ TLFFS

Type	Start	End	Confidence
Cytoplasmic	1	11	0.78
Transmembrane Helix	12	32	0.91
Non-Cytoplasmic	33	38	0.65
Transmembrane Helix	39	57	0.89
Cytoplasmic	58	71	0.64
Transmembrane Helix	72	97	0.81
Non-Cytoplasmic	98	116	0.52
Transmembrane Helix	117	138	0.73
Cytoplasmic	139	142	0.45
Transmembrane Helix	143	162	0.75
Non-Cytoplasmic	163	176	0.64
Transmembrane Helix	177	200	0.88
Cytoplasmic	201	214	0.63
Transmembrane Helix	215	238	0.86
Non-Cytoplasmic	239	255	0.72