YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57238039, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKIGIVGLG YVGAASAYSI VTQGICSELY LYDIKQDLAL AHARDLEDMS AIHFSYTKIF  60
   61 HVPNLENLAS CDIIILAFRK ESLKELPSRL VELQNNILEL KDIVLTLKNA NFKGKYIVAT 120
  121 NPNDTITYYT QVLSQLPKNH VFGSGTNLDS SRLKKFLAKD LNINSKDIFA CMIGEHGDSQ 180
  181 FAALSNASVL GQNLLDFYKQ KLGKDLDIQE LEKAVISEGY FIYERKGRTE FGIGTSCVNL 240
  241 AKAVLEDRKS LHPVSVVFDD IAFSMPAIIG KDGIEKVFEL KFNEKEKIKL ENSKQQIKNA 300
  301 IQSVKDKI

Type	Start	End	Confidence
Signal Peptide	1	17	0.82
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	308	0.99