YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57166782, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGLFMYLFT SEVVSAGHPD KCADIIADTI VDILLKNDKN SRVASEVFVA GNKVVIGGEV  60
   61 KSNHKLSKAD YDNLVKDVLK NIGYDGAGHF SKEQCLHPDE VDVMVFLNEQ SPDINQGVDQ 120
  121 EDGETGAGDQ GIMFGFASCE AEEYMPAAIS YARMLCDRVY AYAKANPHEL GVDIKTQVTI 180
  181 DYGTKANFEN CKPQSIHTIV VSAPCVESMK IEDLRSLVMK LILDSNLPKE LFDPNKTRIL 240
  241 INPTGKYVNH SSLHDSGLTG RKLIVDSFGG YSPIGGGAQS SKDYTKVDRS GLYAGRWLAK 300
  301 NIVAAGLAKK CIVQLSYAIG VAKPTSVSVD CMGTNTSVND DVLSDFVMQN FSLTPNWIRD 360
  361 KFHLDKPSKE TFLYADVAAR GQVGQKDYPW EKLDALEQFK KLL

Type	Start	End	Confidence
Signal Peptide	1	16	0.65
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	403	0.99