YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57237941, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKIAALQFP TLALSESRLD YYLKASKDNG VNLVVLGEYV INSFFTELLH MPKNMIKEQS  60
   61 EAKKESLIKL AKKYELEIIA PYVSVEAKSY KKLCLKVTPN GVKSYEQQIL MPYEHWNEEK 120
  121 FFSNKTPSEL KIFTFNYEKL KCALLFGFET HFDIFWQQIM AKKIDLVIVP SACTFESKQR 180
  181 WEELLKTRAF LNSTSILRVN RIGKTKDEWN FYGDTLFINA FGEIESKLGS EEEMLIIEPK 240
  241 KSDEARKLWG FDKIIKEFKN

Type	Start	End	Confidence
Signal Peptide	1	17	0.73
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	260	0.99