YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57237806, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRINYKKLFN LRKLLSDPKK LFSVLIFTLV VIFIQNYIAQ NSSFEGKVVR IIDGDTIEVN  60
   61 HENKLARIRF FGIDAPELKQ SFGKQSKEAL SRILSGKQVE IIYKNKDTYG RIVAIVKLND 120
  121 VDINRFLVSK GYAWADTYYS NAYTKEQENA KKNHLGLWKE SNPIEPYKWR KHNKF

Type	Start	End	Confidence
Cytoplasmic	1	20	0.91
Transmembrane Helix	21	39	0.91
Non-Cytoplasmic	40	175	0.99