YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATPL_CAMJR
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVLFLLLA CAAVAFAAEI NAPVEQEAIN VWIKAFSVLA AGLGLGVAAL GGAIGMGNTA  60
   61 AATIAGTARN PGLGPKLMTT MFIALAMIEA QVIYALVIAL IALYANPFIV LQ

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	38	0.92
Transmembrane Helix	39	62	0.87
Cytoplasmic	63	80	0.81
Transmembrane Helix	81	104	0.90
Non-Cytoplasmic	105	112	0.86